CS & AI · University of Edinburgh · Healthcare AI & Drug Discovery

Victoria Paterson

Third-year CS & AI student at the University of Edinburgh. Portfolio spans the full early drug development pipeline: multi-label QSAR adverse effect prediction (ChEMBL, SIDER, Morgan fingerprints, SHAP), ODE-based tumour resistance simulation, and conditional VAE for inverse molecular generation. DAAD RISE scholar (publication pending). Passionate about building software that accelerates evidence generation and improves health outcomes.

Healthcare AI Cheminformatics QSAR ODE Modelling VAE Edinburgh, UK

Publications

Submitted · npj Precision Oncology

Multi-Omics Factor Analysis Identifies a Pan-Cancer Immune Exclusion Programme with Tissue-Specific Mechanistic Drivers

Unsupervised MOFA2 analysis across 11,060 TCGA samples spanning 31 cancer types identifies a conserved CEACAM5/B-cell exclusion programme, independently prognostic in the discovery cohort. Dissociated Cox modelling separates tissue-specific mechanistic drivers; external validation in an independent cohort (METABRIC) reported honestly, including a negative prognostic replication result.

MOFA2 Multi-omics Survival Analysis TCGA

Projects

02

TumorEvo: Resistance Dynamics

Four-compartment ODE model (sensitive, resistance A, resistance B, dual-resistant) modelling acquired resistance dynamics relevant to clinical treatment planning. RK4 numerical integration; four clinical dosing schedules (continuous, pulsed, metronomic, escalating); real-time growth/death flux analysis and resistance dynamics visualisation. Full-stack web application with interactive parameter controls.

NumPy SciPy Flask Chart.js ODE
03

SideGen: Conditional Molecular Generation

Conditional GNN-VAE for inverse molecular design: generates candidate molecules conditioned on a target side-effect profile, closing the loop with the QSAR predictor (structure→effect and effect→structure). Systematic conditioning validation across 8 side-effect classes. Dataset expansion via DrugCentral in progress to improve generation quality.

PyTorch GNN VAE RDKit
04

TrialSight

Clinical trial recruitment risk predictor trained on 80,000+ ClinicalTrials.gov records. XGBoost classifier with SHAP interpretability surfaces which trial design factors (eligibility complexity, site count, condition rarity, sponsor type) most increase recruitment risk. Deployed as an interactive dashboard for pre-launch risk assessment.

XGBoost SHAP Flask ClinicalTrials.gov
05

omicsync

Python library for multi-omics data harmonisation — solving recurring ID/ontology mapping, sample intersection, and missing-data problems shared across the projects above. Installable, tested, published on PyPI.

Python PyPI Multi-omics CI/CD

Other Work

06

Deepfake Political Speech Detector

Multimodal AI system detecting manipulated politician videos. XceptionNet/EfficientNet for visual artefact detection (89-98% accuracy), Wav2Vec2 for audio deepfake detection (93-98% accuracy). Late fusion meta-learner combining modalities; target 96-98% combined accuracy.

PyTorch Transformers OpenCV Wav2Vec2 XceptionNet
07

ASL Gesture Recognition

Web-based ASL gesture recognition; ensemble of Random Forest (static) and LSTM (dynamic); 21-point landmark feature engineering with full WebSocket streaming.

MediaPipe OpenCV scikit-learn Flask WebSockets
08

Instagram Hate Comment Detector

Real-time hate speech detection model + Chrome extension for automatic comment blurring; 92% precision on test dataset.

TensorFlow JavaScript Chrome Extensions API

Experience

2026 EDINA · UK National Mapping Service
University of Edinburgh

AI Software Engineering Intern

  • Full-stack LLM integration: Designed and built an LLM-powered conversational interface into a production web platform; implemented semantic search over structured metadata using embedding generation and vector retrieval
  • Web application development: Extended a production platform with new frontend features and backend API endpoints; built interactive data visualisation dashboards for stakeholder use
  • Data pipeline engineering: Developed Python automation scripts for batch processing and format conversion of large-scale structured datasets
  • GeoAI prototyping: Evaluated and deployed pre-trained LLMs (Ollama, OpenAI API); benchmarked model performance against domain-specific retrieval requirements
LLM Embeddings Flask React GeoAI
Summer 2025 RWTH Aachen University
DAAD RISE Scholar

AI Research Intern

  • Built AI-powered chatbot to parse and analyse complex policy documents across multiple countries
  • Developed algorithms to quantify inter-country policy coherence; created visualisation suite for policy direction analysis
  • Research findings currently undergoing publication in academic journal
NLP Transformers Python Research
Present University of Edinburgh

Lab Demonstrator

  • Lead weekly lab sessions for Cognitive Science course; specialise in computer vision and NLP
  • Guide students through implementation of neural network architectures; consistently receive excellent feedback
Computer Vision NLP Teaching
2024 — Present Scottish Policy Forum · Labour Party

Technology Policy Advisor

  • Bring technical perspective to AI and technology policy discussions; collaborate with senior policymakers to draft position papers
Policy AI Governance
About Me.

I'm a third-year Computer Science and Artificial Intelligence student at the University of Edinburgh with a focused portfolio in healthcare AI and computational drug discovery. My projects span the full early drug development pipeline: multilabel QSAR adverse effect prediction, ODE-based tumour resistance simulation, and conditional VAE for inverse molecular generation.

I complement this with a self-directed biomedical informatics curriculum covering biological APIs, sequence analysis, multi-omics, and biomedical NLP. I have two sole-first-author manuscripts currently in peer review (PLOS Genetics; npj Precision Oncology), am a DAAD RISE research scholar, and have production full-stack software deployment experience.

I speak English, Norwegian, and German. Looking for opportunities in AI/ML for healthcare, drug discovery, or biomedical AI research.

Get in touch

Skills

CheminformaticsRDKit, Morgan fingerprints, QSAR
Healthcare AIChEMBL, SIDER, SHAP, ODE
Deep LearningPyTorch, TensorFlow, VAEs
NLPTransformers, spaCy, NLTK
Computer VisionOpenCV, MediaPipe, XceptionNet
BackendFlask, Node.js, REST APIs, WebSockets
FrontendReact, JavaScript, HTML/CSS
DatabasesMongoDB, PostgreSQL
DevOpsGit, Docker, Linux, CI/CD, AWS
LanguagesPython, JavaScript, Java, TypeScript, C#, Haskell
Get in touch

Let's work together.

victoriaflora2005@gmail.com